Supplemental Table 2

Complete data set for the 176 genes assayed for both induced expression and HSF1 binding. The first column is the name of the category. The second column is the gene name. The third column is the accession number of the gene. The fourth column is the ChIP-enrichment measurement, and the last column is the fold-induced expression measurement.
  Gene Name Acc# ChIP enrich Induced Expression
BOUND & INDUCED hypothetical protein FLJ13063 BC014945 12.68 89.65
46 heat shock 70kDa protein 1A NM_005345 245.65 58.54
  DnaJ (Hsp40) homolog, subfmaily B, member 1 NM_006145 17.12 38.72
  heat shock 27kDa protein 2 NM_001541 22.12 34.90
  serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 2 NM_001235 111.29 21.53
  heat shock 70kDa protein 6 (HSP70B') NM_002155 312.89 20.59
  mitochondrial ribosomal protein L18 NM_014161 67.66 17.16
  chromosome 6 open reading frame 37 NM_017633 16.75 17.09
  heat shock protein (hsp110 family) NM_014278 23.07 14.45
  heat shock 105kD NM_006644 653.34 13.40
  tumor necrosis factor receptor superfamily, member 21 BC005192 31.39 10.63
  heat shock 27kDa protein 1 NM_001540 174.23 10.11
  relaxin 1 (H1) BC005956 58.72 9.96
  death effector domain-containing DNA binding protein 2 BC013372 13.98 6.44
  collagen, type IV, alpha 6 NM_033641 6.07 5.69
  FK506 binding protein 4, 59kDa NM_002014 6.28 5.24
  hypothetical protein FLJ22693 NM_022750 9.26 4.95
  crystallin, beta A4 NM_001886 29.57 4.68
  ubiquitin B BC015127 347.68 4.46
  ribosomal protein S14 BC006784 6.54 3.85
  hypothetical protein MGC10814 NM_032671 16.49 3.79
  GPI anchored molecule like protein NM_002066 55.60 3.75
  DnaJ (Hsp40) homolog, subfamily B, member 6 NM_005494 70.75 3.68
  heat shock 70kDa protein 1-like NM_005527 238.60 3.47
  glioblastoma amplified sequence BC001837 35.49 3.42
  MHC class I polypeptide-related sequence A NM_000247 45.89 3.34
  G protein-coupled receptor 4 NM_005282 44.42 3.29
  hypothetical protein LOC63929 NM_022098 159.88 3.14
  heat shock 90kDa protein 1, beta NM_007355 220.28 2.96
  Siah-interacting protein BC005975 60.99 2.94
  hypothetical protein P15-2 NM_018698 241.38 2.92
  TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa NM_005642 116.50 2.81
  suppressor of G2 allele of SKP1, S. cerevisiae, homolog of NM_006704 13.18 2.72
  hypothetical protein MGC8721 NM_016127 41.74 2.66
  chromosome 14 open reading frame 3 NM_012111 36.45 2.56
  myotubularin related protein 8 BC012399 5.92 2.52
  stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) BC002987 226.45 2.48
  coagulation factor VIII, procoagulant component (hemophilia A) NM_000132 21.39 2.19
  suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) NM_003932 174.17 2.17
  hypothetical protein FLJ10830 BC003176 21.30 2.15
  heat shock 10kDa protein 1 (chaperonin 10) NM_002157 154.26 2.14
  fragile X mental retardation, autosomal homolog 1 NM_005087 26.53 2.06
  fibroblast growth factor 18 BC006245 8.01 2.03
  cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1 NM_012124 104.88 2.03
  frizzled homolog 4 (Drosophila) NM_012193 15.20 1.97
  heat shock 60kDa protein 1 (chaperonin) NM_002156 415.79 1.95  
INDUCED NOT DnaJ (Hsp40) homolog, subfamily C, member 3 NM_006260 0.52 49.76
BOUND hypothetical protein DKFZp564I0422 NM_031435 1.83 18.86
24  DnaJ (Hsp40) homolog, subfamily B, member 4 NM_007034 0.76 14.67
  N-acetylated alpha-linked acidic dipeptidase 2 NM_005467 0.33 12.29
  Homo sapiens mRNA; cDNA DKFZp434B102 (from clone DKFZp434B102) BC030800 0.39 11.68
  solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 NM_004213 0.20 6.56
  DKFZP434I1735 protein AB037737 0.30 5.88
  crystallin, mu NM_001888 4.37 5.60
  protein kinase anchoring protein GKAP42 NM_025211 0.24 4.14
  fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, Bombay phenotype included) NM_000148 0.65 3.24
  heat shock 27kDa protein 3 NM_006308 0.32 3.19
  cysteine-rich, angiogenic inducer, 61 BC009199 1.70 3.18
  protein kinase C, alpha NM_002737 0.35 3.16
  hypothetical protein FLJ20558 NM_017880 1.04 3.04
  nuclear receptor coactivator 3 NM_006534 1.63 2.62
  brain-specific protein p25 alpha NM_007030 0.62 2.62
  PR domain containing 2, with ZNF domain NM_012231 0.47 2.38
  CDC-like kinase 4 NM_020666 0.36 2.32
  VCY2 interacting protein 1 BC008806 0.47 2.18
  crystallin, gamma D NM_006891 3.76 2.06
  crystallin, beta A1 NM_005208 0.74 2.06
  crystallin, beta B3 NM_004076 0.28 2.04
  crystallin, gamma A NM_014617 1.18 1.99
  Homo sapiens, clone MGC:15478 IMAGE:2967661, mRNA, complete cds BC010426 1.11 1.97  
BOUND NOT DnaJ (Hsp40) homolog, subfamily A, member 1 NM_001539 325.10 1.76
INDUCED CD48 antigen (B-cell membrane protein) BC016182 196.45 1.26
48  heat shock 70kDa protein 8 NM_006597 191.34 1.83
  nucleolar protein NOP5/NOP58 NM_015934 158.68 1.30
  diacylglycerol kinase, epsilon 64kDa NM_003647 124.74 1.26
  chaperonin containing TCP1, subunit 4 (delta) NM_006430 108.93 1.77
  hypothetical protein FLJ10482 NM_018107 87.16 1.28
  Huntingtin interacting protein K NM_016400 85.42 1.01
  unactive progesterone receptor, 23 kD BC003005 80.55 1.50
  retinoblastoma binding protein 2 NM_005056 72.94 1.89
  ferritin, light polypeptide BC004245 70.46 1.00
  splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) BC005898 70.26 1.07
  BBP-like protein 2 BC008873 60.77 0.80
  chromosome 21 open reading frame 51 NM_058182 55.88 0.74
  heterogeneous nuclear ribonucleoprotein A2/B1 NM_002137 55.24 1.60
  serine hydrolase-like NM_014509 54.05 1.67
  heat shock 70kDa protein 9B (mortalin-2) BC000478 48.40 1.22
  Homo sapiens, clone MGC:27375 IMAGE:4688423, mRNA, complete cds BC017422 46.55 1.24
  hypothetical protein MGC21990 BC015422 45.95 0.79
  ribosomal protein L34 NM_033625 45.91 1.22
  eukaryotic translation initiation factor 5 BC007728 38.47 0.94
  ATPase, Ca++ transporting, type 2C, member 1 NM_014382 33.12 1.77
  synaptosomal-associated protein, 23kDa BC000148 30.44 1.41
  nucleoporin 88kDa BC000335 28.71 0.86
  eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa BC013590 26.71 1.24
  Homo sapiens, Similar to histamine N-methyltransferase, clone MGC:14500 IMAGE:4249496, mRNA, complete cds BC005907 23.00 1.08
  carboxypeptidase E NM_001873 19.95 1.89
  DNA (cytosine-5-)-methyltransferase 2 NM_004412 19.35 0.81
  interferon, alpha 16 NM_002173 19.22 0.75
  hypothetical protein MGC2474 BC001361 19.18 1.02
  guanine nucleotide binding protein 4 NM_004485 18.65 1.10
  microsomal glutathione S-transferase 1 BC005923 17.70 0.94
  hypothetical protein FLJ20422 BC005210 17.37 1.26
  KIAA0721 protein BC009116 16.37 1.60
  tRNA isopentenylpyrophosphate transferase NM_017646 16.14 1.05
  aconitase 2, mitochondrial NM_001098 14.67 0.84
  tumor-associated calcium signal transducer 1 NM_002354 12.80 1.22
  KIAA0999 protein NM_025164 12.69 1.54
  MORF-related gene X NM_012286 11.75 1.94
  hypothetical protein FLJ10352 NM_032142 11.47 0.79
  ribosomal protein L10a BC006791 10.56 1.23
  forkhead box J1 NM_001454 9.76 1.67
  peptidylprolyl isomerase D (cyclophilin D) NM_005038 8.93 1.85
  H19, imprinted maternally expressed untranslated mRNA BC007513 8.19 0.84
  hypothetical protein FLJ22369 NM_032221 7.72 1.01
  hypothetical protein MGC4308 NM_032359 7.29 1.20
  peroxiredoxin 3 BC008038 6.34 0.66
  chromosome 22 open reading frame 2 BC016139 5.15 1.11  
NOT BOUND catenin, beta interacting protein 1 BC014300 4.92 1.14
NOT INDUCED crystallin, alpha B BC007008 4.31
58  activating transcription factor 5 BC005174 2.64 0.59
  hypothetical protein HSPC228 BC005937 2.46 0.89
  inhibitor of growth family, member 3 BC009777 2.40 0.67
  signal recognition particle 54kDa BC003389 1.64 0.93
  hypothetical protein MGC3036 BC001354 1.56 1.05
  hypothetical protein HSPC219 BC002863 1.51 0.99
  DnaJ (Hsp40) homolog, subfamily B, member 12 NM_017626 1.30 0.78
  mutS homolog 5 (E. coli) BC001358 1.22 0.65
  ATPase inhibitor precursor BC001867 1.21 1.07
  dystonia 1, torsion (autosomal dominant; torsin A) BC000674 1.14 0.65
  heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) NM_005347 1.07 1.49
  MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein BC001073 1.05 1.17
  DnaJ (Hsp40) homolog, subfamily B, member 11 NM_016306 1.01 1.17
  DnaJ (Hsp40) homolog, subfamily C, member 4 NM_005528 0.94 0.84
  crystallin, beta B2 NM_000496 0.94 1.86
  similar to arginyl-tRNA synthetase BC010420 0.93 0.84
  hypothetical protein FLJ10404 BC008784 0.92 1.12
  amplified in osteosarcoma BC007254 0.91 1.11
  DnaJ (Hsp40) homolog, subfamily C, member 8 NM_014280 0.88 0.97
  zinc finger protein 359 BC007256 0.88 0.75
  hypothetical protein MGC4606 BC003640 0.80 0.49
  DnaJ (Hsp40) homolog, subfamily C, member 6 NM_014787 0.79 1.28
  hypothetical protein PRO1853 BC004548 0.77 0.87
  chromosome 9 open reading frame 16 BC008887 0.72 0.99
  peroxisomal membrane protein 2, 22kDa BC009836 0.70 0.99
  DnaJ (Hsp40) homolog, subfamily B, member 9 NM_012328 0.70 1.33
  torsin family 1, member B (torsin B) BC015578 0.61 0.91
  hypothetical protein FLJ10468 BC001651 0.61 0.69
  thioredoxin NM_003329 0.60 1.43
  excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D) BC008346 0.57 0.78
  hypothetical protein BC008988 BC008988 0.57 1.29
  crystallin, gamma S NM_017541 0.56 1.55
  stromal cell-derived factor 2 BC001406 0.53 0.81
  tumor rejection antigen (gp96) 1 BC009195 0.52 0.90
  TAL1 (SCL) interrupting locus NM_003035 0.52 1.87
  interleukin 8 NM_000584 0.52 0.68
  DnaJ (Hsp40) homolog, subfamily B, member 5 NM_012266 0.50 0.99
  heat shock 70kDa protein 2 NM_021979 0.47 1.24
  carbohydrate (chondroitin 6) sulfotransferase 3 NM_004273 0.46 1.87
  heat shock protein 75 NM_016292 0.45 1.31
  ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E-like 2 isoform 2 BC008981 0.45 0.82
  cutaneous T-cell lymphoma tumor antigen se70-2 BC000791 0.43 0.75
  hypothetical protein FLJ22570 BC004867 0.39 0.50
  tripartite motif-containing 39 BC007661 0.37 0.60
  kelch-like protein C3IP1 BC004175 0.37 1.17
  WD-repeat protein NM_005828 0.35 1.66
  WEE1+ homolog (S. pombe) NM_003390 0.35 1.80
  benzodiazapine receptor (peripheral) BC001110 0.27 0.95
  homeodomain interacting protein kinase 3 NM_005734 0.26 1.70
  SBBI26 protein NM_018846 0.24 1.87
  serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 1 BC009015 0.19 0.88
  TEA domain family member 1 (SV40 transcriptional enhancer factor) AL833289 0.18 1.93
  heat shock factor binding protein 1 BC007515 0.13 1.03
  ribosomal protein S6 BC009427 0.11 0.93
  proliferation-associated 2G4, 38kDa BC001951 0.07 0.94
  Homo sapiens, clone MGC:9852 IMAGE:3865825, mRNA, complete cds BC009051 0.01 1.26