


Functional Demarcation of Active and Silent Chromatin Domains in Human HOX Loci by Non-Coding RNAs
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RNA Data File Columns : Chromosome
number, nimblescan, sample name, probe start coordinate (HG17), probe
stop coordinate (HG17), probe intensity, strand, blank, annotation |
* Files can be downloaded and extension changed
from .txt to .GFF to be viewed by Nimblegen software (Signal Map) |
RNA Sample number according to Figure 1 |
| Sample 1 : Chest |
| Sample 2 : Abdomen |
| Sample 3 : Umbilicus |
| Sample 4 : Lung |
| Sample 5 : Forearm |
| Sample 6 : Finger |
| Sample 7 : Pubic |
| Sample 8 : Foreskin |
| Sample 9 : Prostate |
| Sample 10 : Thigh |
| Sample 11 : Foot |
| Sample 12 : Foreskin siGFP |
| Sample 13 : Foreskin siHOTAIR |
| Chromatin Immunoprecipitation (ChIP) Data File Columns : Chromosome number, nimblescan, sample name, probe start coordinate (HG17), probe stop coordinate (HG17), probe intensity, strand, blank, annotation |
| * Files can be downloaded and extension changed from .txt to .GFF to be viewed by Nimblegen software (Signal Map) |
| Lung : H3-K27-me3 |
| Lung : H3-K9-me3 |
| Lung : Pol II (8WG) |
| Lung : H3-K4-me2 |
| Lung : Suz12 |
| Foot : H3-K27-me3 |
| Foot : H3-K9-me3 |
| Foot : Pol II (8WG) |
| Foot : Suz12 |
| Foreskin : H3-K27-me3 |
| Foreskin : Suz12 |
| Foreskin : Pol II (8WG) |
| Foreskin : siGFP treated H3-K27-me3 |
| Foreskin : siHOTAIR treated H3-K27-me3 |