Home 
Prostate Cancer Molecular Subtypes 
Figures 
Figures from the manuscript 
Supporting data 
Supporting figures and information  
Explore 
GeneXplore the data  
Data Download & Access 
Download microarray data from manuscript
Authors 
People involved in the project  

GeneXplorer 

GeneXplorer is a web application originally written by Christian Rees at Stanford University and has since been updated by the Stanford Microarray Database, under the auspices of the GMOD project This application allows the exploration of large bodies of gene expression data generated by DNA microarray experiments using a web browser as its interface. GeneXplorer is based on the Windows program TreeView written by Michael Eisen.

A "bird's eye view" of the data is displayed in a "thumbnail" or "Radar" pane on the left, and a blown up view in the "Zoom" pane on the right. The "Radar" gives an overview of the general patterns observable in the expression data after it has been submitted to a clustering procedure.

By clicking on a region of interest in the "Radar" view, a regional enlargement will be displayed in the "Zoom" view. Here an identifier for each tissue core sample is visible. Each row includes a link to retrieve the actual image of the core sample for all antibodies in the dataset used to stain the core sample.

Click here for Treeview GeneXplorer 

[ Home | Figures | Supplement | Explore | Data | Authors ]